Uzbekistan Digital Health Platform - Integrations
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Uzbekistan Digital Health Platform - Integrations - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

Resource Profile: DHIS Specimen Profile ( Experimental )

Official URL: https://dhp.uz/fhir/integrations/StructureDefinition/dhis-specimen Version: 0.1.0
Active as of 2026-07-13 Computable Name: DHISSpecimen

Profile for a biological specimen collected for tuberculosis laboratory testing in the DHIS information system.

Usages:

You can also check for usages in the FHIR IG Statistics

Formal Views of Profile Content

Description Differentials, Snapshots, and other representations.

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* UZCoreSpecimen(0.6.0) Sample for analysis
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... contained 0..* Resource Contained, inline Resources
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
Constraints: ext-1
... accessionIdentifier SΣ 0..1 Identifier Laboratory accession identifier assigned when the specimen is accepted/registered by the laboratory. Used to link the specimen to lab workflows and results.
... status ?!SΣ 0..1 code Current lifecycle status of the specimen (e.g., available, unavailable).
Binding: SpecimenStatus (required)
... type SΣ 0..1 CodeableConcept Type of specimen (e.g., venous blood, urine, swab) used to interpret tests and processing requirements.
Binding: SpecimenTypeVS (0.1.0) (required)
... subject SΣ 0..1 Reference(UZ Core Patient(0.6.0)) Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance.
... receivedTime SΣ 0..1 dateTime Date/time the specimen was received by the laboratory/performing organization. Supports turnaround-time and traceability.
... parent S 0..* Reference(DHIS Specimen Profile(0.1.0)) Reference to the parent specimen when this specimen is derived/aliquoted from another specimen.
... request S 0..* Reference(ServiceRequest) Order/request that triggered the specimen collection. Enables linking specimen to ordered tests/services.
... combined SΣ 0..1 code Whether the container holds a pooled/combined specimen from multiple collection events or sources (if applicable).
Binding: SpecimenCombinedVS (0.6.0) (required)
... role S 0..* CodeableConcept Role of this container in the overall specimen . Supports lab handling and result association.
Binding: SpecimenRoleVS (0.6.0) (preferred)
... feature S 0..1 BackboneElement The physical feature of a specimen
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... type 1..1 CodeableConcept Highlighted feature
Binding: SpecimenFeatureTypeVS (0.1.0) (required)
.... description 1..1 string Information about the feature
... collection S 0..1 BackboneElement Collection details
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... collector SΣ 0..1 Reference(UZ Core Practitioner(0.6.0) | UZ Core PractitionerRole(0.6.0)) Person or role who collected the specimen.
.... collected[x] SΣ 0..1 Date/time (or period) when the specimen was collected. Used for clinical interpretation and lab timing.
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration SΣ 0..1 Duration Duration of the collection process (e.g., timed urine collection). Important for correct result calculation/interpretation.
.... quantity S 0..1 SimpleQuantity(5.0.0) Amount/volume of specimen collected. Used for adequacy checks and processing requirements.
.... method S 0..1 CodeableConcept Technique used to perform collection
Binding: SpecimenCollectionMethodVS (0.6.0) (required)
.... bodySite S 0..1 CodeableReference(BodyStructure) Anatomical site from which the specimen was collected.
Binding: SNOMEDCTBodyStructures (required)
.... fastingStatus[x] SΣ 0..1 Patient fasting status at collection time (or relevant clinical information affecting interpretation).
Binding: RelevantClinicalInformationVS (0.6.0) (required)
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.status Base required Specimen Status 📍5.0.0 FHIR Std.
Specimen.type Base required DHIS Specimen Type ValueSet 📍0.1.0 This IG
Specimen.combined Base required Combined status of a specimen 📍0.6.0 This IG
Specimen.role Base preferred Specimen role 📍0.6.0 This IG
Specimen.feature.type Base required DHIS Specimen Feature Type ValueSet 📍0.1.0 This IG
Specimen.collection.​method Base required Specimen collection methods (temp) 📍0.6.0 This IG
Specimen.collection.​bodySite Base required SNOMED CT Body Structures 📍5.0.0 FHIR Std.
Specimen.collection.​fastingStatus[x] Base required Clinical information 📍0.6.0 This IG

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error Specimen.implicitRules, Specimen.modifierExtension, Specimen.identifier, Specimen.accessionIdentifier, Specimen.status, Specimen.type, Specimen.subject, Specimen.receivedTime, Specimen.parent, Specimen.request, Specimen.combined, Specimen.role, Specimen.feature, Specimen.feature.modifierExtension, Specimen.feature.type, Specimen.feature.description, Specimen.collection, Specimen.collection.modifierExtension, Specimen.collection.collector, Specimen.collection.collected[x], Specimen.collection.duration, Specimen.collection.quantity, Specimen.collection.method, Specimen.collection.bodySite, Specimen.collection.fastingStatus[x] All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error Specimen.modifierExtension, Specimen.feature.modifierExtension, Specimen.collection.modifierExtension Must have either extensions or value[x], not both extension.exists() != value.exists()

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* UZCoreSpecimen(0.6.0) Sample for analysis
... identifier 0..* Identifier Sample identifier
... status 0..1 code Current lifecycle status of the specimen (e.g., available, unavailable).
Binding: SpecimenStatus (required)
... type 0..1 CodeableConcept Type of specimen (e.g., venous blood, urine, swab) used to interpret tests and processing requirements.
Binding: SpecimenTypeVS (0.1.0) (required)
... parent 0..* Reference(DHIS Specimen Profile(0.1.0)) Reference to the parent specimen when this specimen is derived/aliquoted from another specimen.
... feature S 0..1 BackboneElement The physical feature of a specimen
.... type 1..1 CodeableConcept Highlighted feature
Binding: SpecimenFeatureTypeVS (0.1.0) (required)

doco Documentation for this format

Terminology Bindings (Differential)

Path Status Usage ValueSet Version Source
Specimen.status Base required Specimen Status 📍5.0.0 FHIR Std.
Specimen.type Base required DHIS Specimen Type ValueSet 📍0.1.0 This IG
Specimen.feature.type Base required DHIS Specimen Feature Type ValueSet 📍0.1.0 This IG
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* UZCoreSpecimen(0.6.0) Sample for analysis
... id Σ 0..1 id Logical id of this artifact
... meta Σ 0..1 Meta Metadata about the resource
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... text 0..1 Narrative Text summary of the resource, for human interpretation
This profile does not constrain the narrative in regard to content, language, or traceability to data elements
... contained 0..* Resource Contained, inline Resources
... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
Constraints: ext-1
... identifier SΣ 0..* Identifier Sample identifier
... accessionIdentifier SΣ 0..1 Identifier Laboratory accession identifier assigned when the specimen is accepted/registered by the laboratory. Used to link the specimen to lab workflows and results.
... status ?!SΣ 0..1 code Current lifecycle status of the specimen (e.g., available, unavailable).
Binding: SpecimenStatus (required)
... type SΣ 0..1 CodeableConcept Type of specimen (e.g., venous blood, urine, swab) used to interpret tests and processing requirements.
Binding: SpecimenTypeVS (0.1.0) (required)
... subject SΣ 0..1 Reference(UZ Core Patient(0.6.0)) Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance.
... receivedTime SΣ 0..1 dateTime Date/time the specimen was received by the laboratory/performing organization. Supports turnaround-time and traceability.
... parent S 0..* Reference(DHIS Specimen Profile(0.1.0)) Reference to the parent specimen when this specimen is derived/aliquoted from another specimen.
... request S 0..* Reference(ServiceRequest) Order/request that triggered the specimen collection. Enables linking specimen to ordered tests/services.
... combined SΣ 0..1 code Whether the container holds a pooled/combined specimen from multiple collection events or sources (if applicable).
Binding: SpecimenCombinedVS (0.6.0) (required)
... role S 0..* CodeableConcept Role of this container in the overall specimen . Supports lab handling and result association.
Binding: SpecimenRoleVS (0.6.0) (preferred)
... feature S 0..1 BackboneElement The physical feature of a specimen
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... type 1..1 CodeableConcept Highlighted feature
Binding: SpecimenFeatureTypeVS (0.1.0) (required)
.... description 1..1 string Information about the feature
... collection S 0..1 BackboneElement Collection details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... collector SΣ 0..1 Reference(UZ Core Practitioner(0.6.0) | UZ Core PractitionerRole(0.6.0)) Person or role who collected the specimen.
.... collected[x] SΣ 0..1 Date/time (or period) when the specimen was collected. Used for clinical interpretation and lab timing.
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration SΣ 0..1 Duration Duration of the collection process (e.g., timed urine collection). Important for correct result calculation/interpretation.
.... quantity S 0..1 SimpleQuantity(5.0.0) Amount/volume of specimen collected. Used for adequacy checks and processing requirements.
.... method S 0..1 CodeableConcept Technique used to perform collection
Binding: SpecimenCollectionMethodVS (0.6.0) (required)
.... device 0..1 CodeableReference(Device) Device used to perform collection
Binding Description: (example): The device that was used to obtain the specimen (e.g. a catheter or catheter part used to draw the blood via a central line).
.... procedure 0..1 Reference(Procedure) The procedure that collects the specimen
.... bodySite S 0..1 CodeableReference(BodyStructure) Anatomical site from which the specimen was collected.
Binding: SNOMEDCTBodyStructures (required)
.... fastingStatus[x] SΣ 0..1 Patient fasting status at collection time (or relevant clinical information affecting interpretation).
Binding: RelevantClinicalInformationVS (0.6.0) (required)
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration
... processing 0..* BackboneElement Processing and processing step details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... description 0..1 string Textual description of procedure
.... method 0..1 CodeableConcept Indicates the treatment step applied to the specimen
Binding: SpecimenProcessingMethod (example): Type indicating the technique used to process the specimen.
.... additive 0..* Reference(Substance) Material used in the processing step
.... time[x] 0..1 Date and time of specimen processing
..... timeDateTime dateTime
..... timePeriod Period
... container 0..* BackboneElement Direct container of specimen (tube/slide, etc.)
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... device 1..1 Reference(Device) Device resource for the container
.... location 0..1 Reference(Location) Where the container is
.... specimenQuantity 0..1 SimpleQuantity(5.0.0) Quantity of specimen within container
... condition Σ 0..* CodeableConcept State of the specimen
Binding: Hl7VSSpecimenCondition (3.0.0) (extensible): Codes describing the state of the specimen.
... note 0..* Annotation Comments

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.language Base required All Languages 📍5.0.0 FHIR Std.
Specimen.status Base required Specimen Status 📍5.0.0 FHIR Std.
Specimen.type Base required DHIS Specimen Type ValueSet 📍0.1.0 This IG
Specimen.combined Base required Combined status of a specimen 📍0.6.0 This IG
Specimen.role Base preferred Specimen role 📍0.6.0 This IG
Specimen.feature.type Base required DHIS Specimen Feature Type ValueSet 📍0.1.0 This IG
Specimen.collection.​method Base required Specimen collection methods (temp) 📍0.6.0 This IG
Specimen.collection.​device Base example Not State Unknown
Specimen.collection.​bodySite Base required SNOMED CT Body Structures 📍5.0.0 FHIR Std.
Specimen.collection.​fastingStatus[x] Base required Clinical information 📍0.6.0 This IG
Specimen.processing.​method Base example Specimen Processing Method 📍5.0.0 FHIR Std.
Specimen.condition Base extensible hl7VS-specimenCondition 📍3.0.0 THO v7.2

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error Specimen.meta, Specimen.implicitRules, Specimen.language, Specimen.text, Specimen.extension, Specimen.modifierExtension, Specimen.identifier, Specimen.accessionIdentifier, Specimen.status, Specimen.type, Specimen.subject, Specimen.receivedTime, Specimen.parent, Specimen.request, Specimen.combined, Specimen.role, Specimen.feature, Specimen.feature.extension, Specimen.feature.modifierExtension, Specimen.feature.type, Specimen.feature.description, Specimen.collection, Specimen.collection.extension, Specimen.collection.modifierExtension, Specimen.collection.collector, Specimen.collection.collected[x], Specimen.collection.duration, Specimen.collection.quantity, Specimen.collection.method, Specimen.collection.device, Specimen.collection.procedure, Specimen.collection.bodySite, Specimen.collection.fastingStatus[x], Specimen.processing, Specimen.processing.extension, Specimen.processing.modifierExtension, Specimen.processing.description, Specimen.processing.method, Specimen.processing.additive, Specimen.processing.time[x], Specimen.container, Specimen.container.extension, Specimen.container.modifierExtension, Specimen.container.device, Specimen.container.location, Specimen.container.specimenQuantity, Specimen.condition, Specimen.note All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error Specimen.extension, Specimen.modifierExtension, Specimen.feature.extension, Specimen.feature.modifierExtension, Specimen.collection.extension, Specimen.collection.modifierExtension, Specimen.processing.extension, Specimen.processing.modifierExtension, Specimen.container.extension, Specimen.container.modifierExtension Must have either extensions or value[x], not both extension.exists() != value.exists()

Key Elements View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* UZCoreSpecimen(0.6.0) Sample for analysis
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... contained 0..* Resource Contained, inline Resources
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
Constraints: ext-1
... accessionIdentifier SΣ 0..1 Identifier Laboratory accession identifier assigned when the specimen is accepted/registered by the laboratory. Used to link the specimen to lab workflows and results.
... status ?!SΣ 0..1 code Current lifecycle status of the specimen (e.g., available, unavailable).
Binding: SpecimenStatus (required)
... type SΣ 0..1 CodeableConcept Type of specimen (e.g., venous blood, urine, swab) used to interpret tests and processing requirements.
Binding: SpecimenTypeVS (0.1.0) (required)
... subject SΣ 0..1 Reference(UZ Core Patient(0.6.0)) Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance.
... receivedTime SΣ 0..1 dateTime Date/time the specimen was received by the laboratory/performing organization. Supports turnaround-time and traceability.
... parent S 0..* Reference(DHIS Specimen Profile(0.1.0)) Reference to the parent specimen when this specimen is derived/aliquoted from another specimen.
... request S 0..* Reference(ServiceRequest) Order/request that triggered the specimen collection. Enables linking specimen to ordered tests/services.
... combined SΣ 0..1 code Whether the container holds a pooled/combined specimen from multiple collection events or sources (if applicable).
Binding: SpecimenCombinedVS (0.6.0) (required)
... role S 0..* CodeableConcept Role of this container in the overall specimen . Supports lab handling and result association.
Binding: SpecimenRoleVS (0.6.0) (preferred)
... feature S 0..1 BackboneElement The physical feature of a specimen
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... type 1..1 CodeableConcept Highlighted feature
Binding: SpecimenFeatureTypeVS (0.1.0) (required)
.... description 1..1 string Information about the feature
... collection S 0..1 BackboneElement Collection details
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... collector SΣ 0..1 Reference(UZ Core Practitioner(0.6.0) | UZ Core PractitionerRole(0.6.0)) Person or role who collected the specimen.
.... collected[x] SΣ 0..1 Date/time (or period) when the specimen was collected. Used for clinical interpretation and lab timing.
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration SΣ 0..1 Duration Duration of the collection process (e.g., timed urine collection). Important for correct result calculation/interpretation.
.... quantity S 0..1 SimpleQuantity(5.0.0) Amount/volume of specimen collected. Used for adequacy checks and processing requirements.
.... method S 0..1 CodeableConcept Technique used to perform collection
Binding: SpecimenCollectionMethodVS (0.6.0) (required)
.... bodySite S 0..1 CodeableReference(BodyStructure) Anatomical site from which the specimen was collected.
Binding: SNOMEDCTBodyStructures (required)
.... fastingStatus[x] SΣ 0..1 Patient fasting status at collection time (or relevant clinical information affecting interpretation).
Binding: RelevantClinicalInformationVS (0.6.0) (required)
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.status Base required Specimen Status 📍5.0.0 FHIR Std.
Specimen.type Base required DHIS Specimen Type ValueSet 📍0.1.0 This IG
Specimen.combined Base required Combined status of a specimen 📍0.6.0 This IG
Specimen.role Base preferred Specimen role 📍0.6.0 This IG
Specimen.feature.type Base required DHIS Specimen Feature Type ValueSet 📍0.1.0 This IG
Specimen.collection.​method Base required Specimen collection methods (temp) 📍0.6.0 This IG
Specimen.collection.​bodySite Base required SNOMED CT Body Structures 📍5.0.0 FHIR Std.
Specimen.collection.​fastingStatus[x] Base required Clinical information 📍0.6.0 This IG

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error Specimen.implicitRules, Specimen.modifierExtension, Specimen.identifier, Specimen.accessionIdentifier, Specimen.status, Specimen.type, Specimen.subject, Specimen.receivedTime, Specimen.parent, Specimen.request, Specimen.combined, Specimen.role, Specimen.feature, Specimen.feature.modifierExtension, Specimen.feature.type, Specimen.feature.description, Specimen.collection, Specimen.collection.modifierExtension, Specimen.collection.collector, Specimen.collection.collected[x], Specimen.collection.duration, Specimen.collection.quantity, Specimen.collection.method, Specimen.collection.bodySite, Specimen.collection.fastingStatus[x] All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error Specimen.modifierExtension, Specimen.feature.modifierExtension, Specimen.collection.modifierExtension Must have either extensions or value[x], not both extension.exists() != value.exists()

Differential View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* UZCoreSpecimen(0.6.0) Sample for analysis
... identifier 0..* Identifier Sample identifier
... status 0..1 code Current lifecycle status of the specimen (e.g., available, unavailable).
Binding: SpecimenStatus (required)
... type 0..1 CodeableConcept Type of specimen (e.g., venous blood, urine, swab) used to interpret tests and processing requirements.
Binding: SpecimenTypeVS (0.1.0) (required)
... parent 0..* Reference(DHIS Specimen Profile(0.1.0)) Reference to the parent specimen when this specimen is derived/aliquoted from another specimen.
... feature S 0..1 BackboneElement The physical feature of a specimen
.... type 1..1 CodeableConcept Highlighted feature
Binding: SpecimenFeatureTypeVS (0.1.0) (required)

doco Documentation for this format

Terminology Bindings (Differential)

Path Status Usage ValueSet Version Source
Specimen.status Base required Specimen Status 📍5.0.0 FHIR Std.
Specimen.type Base required DHIS Specimen Type ValueSet 📍0.1.0 This IG
Specimen.feature.type Base required DHIS Specimen Feature Type ValueSet 📍0.1.0 This IG

Snapshot ViewView

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Specimen 0..* UZCoreSpecimen(0.6.0) Sample for analysis
... id Σ 0..1 id Logical id of this artifact
... meta Σ 0..1 Meta Metadata about the resource
... implicitRules ?!Σ 0..1 uri A set of rules under which this content was created
... text 0..1 Narrative Text summary of the resource, for human interpretation
This profile does not constrain the narrative in regard to content, language, or traceability to data elements
... contained 0..* Resource Contained, inline Resources
... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored
Constraints: ext-1
... identifier SΣ 0..* Identifier Sample identifier
... accessionIdentifier SΣ 0..1 Identifier Laboratory accession identifier assigned when the specimen is accepted/registered by the laboratory. Used to link the specimen to lab workflows and results.
... status ?!SΣ 0..1 code Current lifecycle status of the specimen (e.g., available, unavailable).
Binding: SpecimenStatus (required)
... type SΣ 0..1 CodeableConcept Type of specimen (e.g., venous blood, urine, swab) used to interpret tests and processing requirements.
Binding: SpecimenTypeVS (0.1.0) (required)
... subject SΣ 0..1 Reference(UZ Core Patient(0.6.0)) Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance.
... receivedTime SΣ 0..1 dateTime Date/time the specimen was received by the laboratory/performing organization. Supports turnaround-time and traceability.
... parent S 0..* Reference(DHIS Specimen Profile(0.1.0)) Reference to the parent specimen when this specimen is derived/aliquoted from another specimen.
... request S 0..* Reference(ServiceRequest) Order/request that triggered the specimen collection. Enables linking specimen to ordered tests/services.
... combined SΣ 0..1 code Whether the container holds a pooled/combined specimen from multiple collection events or sources (if applicable).
Binding: SpecimenCombinedVS (0.6.0) (required)
... role S 0..* CodeableConcept Role of this container in the overall specimen . Supports lab handling and result association.
Binding: SpecimenRoleVS (0.6.0) (preferred)
... feature S 0..1 BackboneElement The physical feature of a specimen
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... type 1..1 CodeableConcept Highlighted feature
Binding: SpecimenFeatureTypeVS (0.1.0) (required)
.... description 1..1 string Information about the feature
... collection S 0..1 BackboneElement Collection details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... collector SΣ 0..1 Reference(UZ Core Practitioner(0.6.0) | UZ Core PractitionerRole(0.6.0)) Person or role who collected the specimen.
.... collected[x] SΣ 0..1 Date/time (or period) when the specimen was collected. Used for clinical interpretation and lab timing.
..... collectedDateTime dateTime
..... collectedPeriod Period
.... duration SΣ 0..1 Duration Duration of the collection process (e.g., timed urine collection). Important for correct result calculation/interpretation.
.... quantity S 0..1 SimpleQuantity(5.0.0) Amount/volume of specimen collected. Used for adequacy checks and processing requirements.
.... method S 0..1 CodeableConcept Technique used to perform collection
Binding: SpecimenCollectionMethodVS (0.6.0) (required)
.... device 0..1 CodeableReference(Device) Device used to perform collection
Binding Description: (example): The device that was used to obtain the specimen (e.g. a catheter or catheter part used to draw the blood via a central line).
.... procedure 0..1 Reference(Procedure) The procedure that collects the specimen
.... bodySite S 0..1 CodeableReference(BodyStructure) Anatomical site from which the specimen was collected.
Binding: SNOMEDCTBodyStructures (required)
.... fastingStatus[x] SΣ 0..1 Patient fasting status at collection time (or relevant clinical information affecting interpretation).
Binding: RelevantClinicalInformationVS (0.6.0) (required)
..... fastingStatusCodeableConcept CodeableConcept
..... fastingStatusDuration Duration
... processing 0..* BackboneElement Processing and processing step details
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... description 0..1 string Textual description of procedure
.... method 0..1 CodeableConcept Indicates the treatment step applied to the specimen
Binding: SpecimenProcessingMethod (example): Type indicating the technique used to process the specimen.
.... additive 0..* Reference(Substance) Material used in the processing step
.... time[x] 0..1 Date and time of specimen processing
..... timeDateTime dateTime
..... timePeriod Period
... container 0..* BackboneElement Direct container of specimen (tube/slide, etc.)
.... id 0..1 string Unique id for inter-element referencing
.... extension 0..* Extension Additional content defined by implementations
Constraints: ext-1
.... modifierExtension ?!Σ 0..* Extension Extensions that cannot be ignored even if unrecognized
Constraints: ext-1
.... device 1..1 Reference(Device) Device resource for the container
.... location 0..1 Reference(Location) Where the container is
.... specimenQuantity 0..1 SimpleQuantity(5.0.0) Quantity of specimen within container
... condition Σ 0..* CodeableConcept State of the specimen
Binding: Hl7VSSpecimenCondition (3.0.0) (extensible): Codes describing the state of the specimen.
... note 0..* Annotation Comments

doco Documentation for this format

Terminology Bindings

Path Status Usage ValueSet Version Source
Specimen.language Base required All Languages 📍5.0.0 FHIR Std.
Specimen.status Base required Specimen Status 📍5.0.0 FHIR Std.
Specimen.type Base required DHIS Specimen Type ValueSet 📍0.1.0 This IG
Specimen.combined Base required Combined status of a specimen 📍0.6.0 This IG
Specimen.role Base preferred Specimen role 📍0.6.0 This IG
Specimen.feature.type Base required DHIS Specimen Feature Type ValueSet 📍0.1.0 This IG
Specimen.collection.​method Base required Specimen collection methods (temp) 📍0.6.0 This IG
Specimen.collection.​device Base example Not State Unknown
Specimen.collection.​bodySite Base required SNOMED CT Body Structures 📍5.0.0 FHIR Std.
Specimen.collection.​fastingStatus[x] Base required Clinical information 📍0.6.0 This IG
Specimen.processing.​method Base example Specimen Processing Method 📍5.0.0 FHIR Std.
Specimen.condition Base extensible hl7VS-specimenCondition 📍3.0.0 THO v7.2

Constraints

Id Grade Path(s) Description Expression
dom-2 error Specimen If the resource is contained in another resource, it SHALL NOT contain nested Resources contained.contained.empty()
dom-3 error Specimen If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().ofType(canonical) | %resource.descendants().ofType(uri) | %resource.descendants().ofType(url))) or descendants().where(reference = '#').exists() or descendants().where(ofType(canonical) = '#').exists() or descendants().where(ofType(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4 error Specimen If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5 error Specimen If a resource is contained in another resource, it SHALL NOT have a security label contained.meta.security.empty()
dom-6 best practice Specimen A resource should have narrative for robust management text.`div`.exists()
ele-1 error Specimen.meta, Specimen.implicitRules, Specimen.language, Specimen.text, Specimen.extension, Specimen.modifierExtension, Specimen.identifier, Specimen.accessionIdentifier, Specimen.status, Specimen.type, Specimen.subject, Specimen.receivedTime, Specimen.parent, Specimen.request, Specimen.combined, Specimen.role, Specimen.feature, Specimen.feature.extension, Specimen.feature.modifierExtension, Specimen.feature.type, Specimen.feature.description, Specimen.collection, Specimen.collection.extension, Specimen.collection.modifierExtension, Specimen.collection.collector, Specimen.collection.collected[x], Specimen.collection.duration, Specimen.collection.quantity, Specimen.collection.method, Specimen.collection.device, Specimen.collection.procedure, Specimen.collection.bodySite, Specimen.collection.fastingStatus[x], Specimen.processing, Specimen.processing.extension, Specimen.processing.modifierExtension, Specimen.processing.description, Specimen.processing.method, Specimen.processing.additive, Specimen.processing.time[x], Specimen.container, Specimen.container.extension, Specimen.container.modifierExtension, Specimen.container.device, Specimen.container.location, Specimen.container.specimenQuantity, Specimen.condition, Specimen.note All FHIR elements must have a @value or children hasValue() or (children().count() > id.count())
ext-1 error Specimen.extension, Specimen.modifierExtension, Specimen.feature.extension, Specimen.feature.modifierExtension, Specimen.collection.extension, Specimen.collection.modifierExtension, Specimen.processing.extension, Specimen.processing.modifierExtension, Specimen.container.extension, Specimen.container.modifierExtension Must have either extensions or value[x], not both extension.exists() != value.exists()

 

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